Function reference • GillespieSSA2

All functions

GillespieSSA2 GillespieSSA2-package: GillespieSSA2: Gillespie's Stochastic Simulation Algorithm for impatient people.

compile_reactions(): Precompile the reactions

ode_em(): Euler-Maruyama method (EM)

plot_ssa(): Simple plotting of ssa output

port_reactions(): Port GillespieSSA parameters to GillespieSSA2

print(<SSA_reaction>) print(<SSA_method>): Print various SSA objects

reaction(): Define a reaction

ssa(): Invoking the stochastic simulation algorithm

ssa_btl(): Binomial tau-leap method (BTL)

ssa_etl(): Explicit tau-leap method (ETL)

ssa_exact(): Exact method