Binomial tau-leap method (BTL)

Binomial tau-leap method implementation of the SSA as described by Chatterjee et al. (2005).

Usage

ssa_btl(mean_firings = 10)

Arguments

mean_firings

A coarse-graining factor of how many firings will occur at each iteration on average. Depending on the propensity functions, a value for mean_firings will result in warnings generated and a loss of accuracy.

Value

an object of to be used by ssa().

References

Chatterjee A., Vlachos D.G., and Katsoulakis M.A. 2005. Binomial distribution based tau-leap accelerated stochastic simulation. J. Chem. Phys. 122:024112. doi:10.1063/1.1833357 .